BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D09SP1|AL426362
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1053 0.0
>3x_Contig1655
Length = 16228
Score = 1053 bits (516), Expect = 0.0
Identities = 717/801 (89%), Gaps = 1/801 (0%)
Strand = Plus / Minus
Query: 1 tatatangataattattacgatttgattaaagtggatgaratactaaaagagatgactga 60
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 8408 tatatacgataattattacgatttgattaaagtggatgaaatactaaaagagatgactca 8349
Query: 61 gttggatgaatccttagtggaggaactgcgagaracgtgcaatatgggtcgacccatgtt 120
|||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||
Sbjct: 8348 gttggatgaatccttagtggagcaactgcgagaaacgtgcaatatggctcgacccatgtt 8289
Query: 121 gaaasagtgacggtatgcgctgcatgtggtatattstttatttsccagatbatsctcgts 180
|||| |||||||||||||||||||||| ||||||| ||||||| |||||| || |||||
Sbjct: 8288 gaaacagtgacggtatgcgctgcatgtcgtatattctttatttcccagatcatcctcgtc 8229
Query: 181 ctatgaactatkatgatctttgttctttgatagattttgtattattactacgaatatgat 240
|||| |||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||
Sbjct: 8228 ctatcaactatcatgatctttgttctttcatagattttgtattattactaccaatatcat 8169
Query: 241 ctttatgstgctcgttattaatataaggrgctggaaagrtcccgtgttcagcagagtggc 300
|||||| |||||||||||||||||||| ||| |||| |||||| ||||||||||| ||
Sbjct: 8168 ctttatcctgctcgttattaatataaggacctgcaaagatcccgtcttcagcagagtcgc 8109
Query: 301 satcgattcsgtttatttbtatacstacggaactgcttgtgctacggagatcgtkatcat 360
|||||||| |||||||| ||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 8108 catcgattccgtttatttctatacctacggaactgcttgtgctaccgacatcgtcatcat 8049
Query: 361 cgaattyaccagtrccattgcgaaassatttaaatktgcagsaccatatgadatgggaag 420
|||||| |||||| ||||||| ||| |||||||| ||||| ||||||||| ||||||||
Sbjct: 8048 cgaattcaccagtaccattgccaaaccatttaaatctgcagcaccatatgaaatgggaag 7989
Query: 421 ggaatatkscgaggtctaacggtgcgacgacagggtagaatagaattkssatgatatcga 480
|||||| |||| ||||||| ||||||||||| || |||| |||| |||||||| |
Sbjct: 7988 cgaatatcccgagctctaacgctgcgacgacagcatacaatacaattcccatgatatcca 7929
Query: 481 tgttcsctacaataacagtgggaatggtacaccatggaccaagtgagtgaacaaagaaga 540
||||| ||||||||||| ||| |||| ||||||||| ||||||||||| |||||| ||||
Sbjct: 7928 tgttccctacaataacactggcaatgctacaccatgcaccaagtgagtcaacaaacaaga 7869
Query: 541 atatgaratttatgcgaacgagacgtgggtgaagtttcggaagctgaaaatatggtggga 600
|||||| |||||||| ||||| |||| ||| |||||| ||||| ||||||||||||||
Sbjct: 7868 atatgaaatttatgccaacgacacgtccctgacgtttcgcaagctcaaaatatggtggga 7809
Query: 601 tgaatggtgctgckag-daaatagtgggaatgatttgtatkagtagcgctggcgaatgag 659
| ||| |||||| || ||||||||| ||||||| ||| | |||||||||| ||||||
Sbjct: 7808 tcaatcctgctgcaagcaaaatagtggcaatgattcctatcactagcgctggccaatgag 7749
Query: 660 tacgatgatcatacaccggtcttaaccaaagagtaaaccctatctcaaagctgacaatga 719
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7748 taccatgatcatacaccggtcttaaccaaagagtaaaccctatctcaaagctgacaatga 7689
Query: 720 ataatatcatgggtaaaatacatcgaagcaagatctttttcacagagagactgtkagggg 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 7688 ataatatcatgggtaaaatacatcgaagcaagatctttttcacagagagactgtaagggg 7629
Query: 780 gataatataatgattgaaccc 800
|||||||||||||||||||||
Sbjct: 7628 gataatataatgattgaaccc 7608
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3677
Number of Sequences: 1807
Number of extensions: 3677
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.5 bits)